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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs74522619 chr15:58315598 T/C ARID3A chr19:925781-975939:+ -0.5 -5.9 6.98E-9 Box Plot
THCA rs74527997 chr1:175000887 T/C SERPINC1 chr1:173872942-173886516:- 0.66 8.01 9.0E-15 Box Plot
THCA rs74545228 chr2:113024359 A/T RGPD5 chr2:110550335-110615272:+ -0.52 -7.25 1.74E-12 Box Plot
THCA rs74564330 chr12:94795267 C/T C6orf176 chr6:166337536-166401527:- -0.53 -5.93 5.75E-9 Box Plot
THCA rs7457405 chr7:144118326 A/G OR2A4 chr6:132021609-132022541:- 0.37 6.11 2.09E-9 Box Plot
THCA rs74574656 chr2:113063450 T/A RGPD5 chr2:110550335-110615272:+ -0.48 -6.91 1.58E-11 Box Plot
THCA rs7457619 chr7:140138367 T/C LOC441455 chr9:99488103-99489749:+ 0.47 6.27 7.95E-10 Box Plot
THCA rs745937 chr1:144865627 C/T NBPF14 chr1:148003642-148025863:- -0.42 -10.27 1.68E-22 Box Plot
THCA rs7459532 chr8:10261068 C/T SGK223 chr8:8175258-8244008:- 0.31 6.22 1.1E-9 Box Plot
THCA rs7459545 chr8:11804389 G/T SGK223 chr8:8175258-8244008:- -0.46 -8.5 2.43E-16 Box Plot
THCA rs7459983 chr8:11807221 T/C SGK223 chr8:8175258-8244008:- -0.46 -8.47 3.03E-16 Box Plot
THCA rs74600755 chr2:113008599 C/A RGPD5 chr2:110550335-110615272:+ -0.46 -6.6 1.11E-10 Box Plot
THCA rs7460153 chr8:11781997 C/A SGK223 chr8:8175258-8244008:- -0.46 -8.62 9.62E-17 Box Plot
THCA rs74601798 chr3:125687674 G/A ROPN1 chr3:123687368-123711025:- -0.35 -6.27 8.27E-10 Box Plot
THCA rs7460263 chr8:11782385 C/T SGK223 chr8:8175258-8244008:- -0.45 -8.61 1.07E-16 Box Plot